Cluster: HRGMv2_2748_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2748
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1137 | 1174722 | 1175660 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2748_1 | HRGMv2_2748_1_1138 | 1175679 | 1178081 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1139 | 1178139 | 1179191 | - | GT4 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1140 | 1179188 | 1180342 | - | GT4 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_1141 | 1180376 | 1181788 | - | 9.B.18.1.1 |
Gene ID: HRGMv2_2748_1_1137
Type: CAZyme
Location: 1174722 - 1175660 (-)
Type: CAZyme
Location: 1174722 - 1175660 (-)
Gene ID: HRGMv2_2748_1_1138
Type:
Location: 1175679 - 1178081 (-)
Type:
Location: 1175679 - 1178081 (-)
Gene ID: HRGMv2_2748_1_1139
Type: CAZyme
Location: 1178139 - 1179191 (-)
Type: CAZyme
Location: 1178139 - 1179191 (-)
Gene ID: HRGMv2_2748_1_1140
Type: CAZyme
Location: 1179188 - 1180342 (-)
Type: CAZyme
Location: 1179188 - 1180342 (-)
Gene ID: HRGMv2_2748_1_1141
Type: TC
Location: 1180376 - 1181788 (-)
Type: TC
Location: 1180376 - 1181788 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.