Cluster: HRGMv2_2748_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2748
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_42 | 44247 | 45764 | + | GH77 |
| STP | HRGMv2_2748_1 | HRGMv2_2748_1_43 | 45915 | 46706 | + | GGDEF |
| NULL(UNKNOWN) | HRGMv2_2748_1 | HRGMv2_2748_1_44 | 46776 | 47207 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_45 | 47415 | 48455 | - | 9.A.23.1.1 |
Gene ID: HRGMv2_2748_1_42
Type: CAZyme
Location: 44247 - 45764 (+)
Type: CAZyme
Location: 44247 - 45764 (+)
Gene ID: HRGMv2_2748_1_43
Type: STP
Location: 45915 - 46706 (+)
Type: STP
Location: 45915 - 46706 (+)
Gene ID: HRGMv2_2748_1_44
Type:
Location: 46776 - 47207 (+)
Type:
Location: 46776 - 47207 (+)
Gene ID: HRGMv2_2748_1_45
Type: TC
Location: 47415 - 48455 (-)
Type: TC
Location: 47415 - 48455 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.