Cluster: HRGMv2_2743_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2743
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2743_10 | HRGMv2_2743_10_54 | 40928 | 42244 | + | GH3 |
| TF | HRGMv2_2743_10 | HRGMv2_2743_10_55 | 42299 | 42751 | - | MarR |
| pfam | HRGMv2_2743_10 | HRGMv2_2743_10_56 | 42933 | 45692 | + | Ald_Xan_dh_C | Fer2_2 | MoCoBD_1 | MoCoBD_2 |
| TC | HRGMv2_2743_10 | HRGMv2_2743_10_57 | 45829 | 47601 | - | 3.A.1.135.6 |
| TC | HRGMv2_2743_10 | HRGMv2_2743_10_58 | 47614 | 49368 | - | 3.A.1.135.6 |
| TF | HRGMv2_2743_10 | HRGMv2_2743_10_59 | 49371 | 49844 | - | MarR |
| TC | HRGMv2_2743_10 | HRGMv2_2743_10_60 | 50041 | 51183 | - | 2.A.45.2.6 |
Gene ID: HRGMv2_2743_10_54
Type: CAZyme
Location: 40928 - 42244 (+)
Type: CAZyme
Location: 40928 - 42244 (+)
Gene ID: HRGMv2_2743_10_55
Type: TF
Location: 42299 - 42751 (-)
Type: TF
Location: 42299 - 42751 (-)
Gene ID: HRGMv2_2743_10_56
Type: pfam
Location: 42933 - 45692 (+)
Type: pfam
Location: 42933 - 45692 (+)
Gene ID: HRGMv2_2743_10_57
Type: TC
Location: 45829 - 47601 (-)
Type: TC
Location: 45829 - 47601 (-)
Gene ID: HRGMv2_2743_10_58
Type: TC
Location: 47614 - 49368 (-)
Type: TC
Location: 47614 - 49368 (-)
Gene ID: HRGMv2_2743_10_59
Type: TF
Location: 49371 - 49844 (-)
Type: TF
Location: 49371 - 49844 (-)
Gene ID: HRGMv2_2743_10_60
Type: TC
Location: 50041 - 51183 (-)
Type: TC
Location: 50041 - 51183 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UBA738
Species
UBA738 sp003522945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2743_10_60 | vegetarian > vegan | 1.09516 | 0.00360 |