Cluster: HRGMv2_2735_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2735
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2735_11 | HRGMv2_2735_11_20 | 24058 | 24828 | - | 2.A.5.5.5 |
| pfam | HRGMv2_2735_11 | HRGMv2_2735_11_21 | 25196 | 25633 | + | RbsD_FucU |
| CAZyme | HRGMv2_2735_11 | HRGMv2_2735_11_22 | 25637 | 26704 | + | GH33 |
Gene ID: HRGMv2_2735_11_20
Type: TC
Location: 24058 - 24828 (-)
Type: TC
Location: 24058 - 24828 (-)
Gene ID: HRGMv2_2735_11_21
Type: pfam
Location: 25196 - 25633 (+)
Type: pfam
Location: 25196 - 25633 (+)
Gene ID: HRGMv2_2735_11_22
Type: CAZyme
Location: 25637 - 26704 (+)
Type: CAZyme
Location: 25637 - 26704 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
SFJ001
Species
SFJ001 sp004555865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.