Cluster: HRGMv2_2735_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2735
- CGC Family ID: CGCFAM_00764
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2735_11 | HRGMv2_2735_11_8 | 9030 | 12011 | - | GT39 |
| STP | HRGMv2_2735_11 | HRGMv2_2735_11_9 | 12025 | 12636 | - | NUDIX |
| pfam | HRGMv2_2735_11 | HRGMv2_2735_11_10 | 12812 | 14209 | - | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| TC | HRGMv2_2735_11 | HRGMv2_2735_11_11 | 14608 | 15183 | - | 4.F.1.1.8 |
Gene ID: HRGMv2_2735_11_8
Type: CAZyme
Location: 9030 - 12011 (-)
Type: CAZyme
Location: 9030 - 12011 (-)
Gene ID: HRGMv2_2735_11_9
Type: STP
Location: 12025 - 12636 (-)
Type: STP
Location: 12025 - 12636 (-)
Gene ID: HRGMv2_2735_11_10
Type: pfam
Location: 12812 - 14209 (-)
Type: pfam
Location: 12812 - 14209 (-)
Gene ID: HRGMv2_2735_11_11
Type: TC
Location: 14608 - 15183 (-)
Type: TC
Location: 14608 - 15183 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
SFJ001
Species
SFJ001 sp004555865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.