Cluster: HRGMv2_2735_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2735
- CGC Family ID: CGCFAM_10165
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2735_8 | HRGMv2_2735_8_21 | 21897 | 23288 | - | 2.A.22.5.3 |
| TC | HRGMv2_2735_8 | HRGMv2_2735_8_22 | 24162 | 25898 | + | 2.A.114.1.3 |
| CAZyme | HRGMv2_2735_8 | HRGMv2_2735_8_23 | 26175 | 27347 | + | GT4 |
| pfam | HRGMv2_2735_8 | HRGMv2_2735_8_24 | 27344 | 27943 | + | VTT_dom |
| CAZyme | HRGMv2_2735_8 | HRGMv2_2735_8_25 | 27990 | 29033 | + | GT4 |
Gene ID: HRGMv2_2735_8_21
Type: TC
Location: 21897 - 23288 (-)
Type: TC
Location: 21897 - 23288 (-)
Gene ID: HRGMv2_2735_8_22
Type: TC
Location: 24162 - 25898 (+)
Type: TC
Location: 24162 - 25898 (+)
Gene ID: HRGMv2_2735_8_23
Type: CAZyme
Location: 26175 - 27347 (+)
Type: CAZyme
Location: 26175 - 27347 (+)
Gene ID: HRGMv2_2735_8_24
Type: pfam
Location: 27344 - 27943 (+)
Type: pfam
Location: 27344 - 27943 (+)
Gene ID: HRGMv2_2735_8_25
Type: CAZyme
Location: 27990 - 29033 (+)
Type: CAZyme
Location: 27990 - 29033 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
SFJ001
Species
SFJ001 sp004555865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.