Cluster: HRGMv2_2735_CGC4
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_2735
- CGC Family ID: CGCFAM_00050
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2735_5 | HRGMv2_2735_5_28 | 34087 | 35091 | - | GT10 |
| NULL(UNKNOWN) | HRGMv2_2735_5 | HRGMv2_2735_5_29 | 35088 | 36644 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2735_5 | HRGMv2_2735_5_30 | 36650 | 37888 | - | GT4 |
| CAZyme | HRGMv2_2735_5 | HRGMv2_2735_5_31 | 37888 | 38865 | - | GT2 |
| CAZyme | HRGMv2_2735_5 | HRGMv2_2735_5_32 | 38992 | 40128 | - | GT4 |
| CAZyme | HRGMv2_2735_5 | HRGMv2_2735_5_33 | 40138 | 40881 | - | GT32 |
| CAZyme | HRGMv2_2735_5 | HRGMv2_2735_5_34 | 40924 | 42027 | - | GT4 |
| pfam | HRGMv2_2735_5 | HRGMv2_2735_5_35 | 42050 | 43069 | - | Radical_SAM | SPASM |
| CAZyme | HRGMv2_2735_5 | HRGMv2_2735_5_36 | 43217 | 44449 | - | GT4 |
| TC | HRGMv2_2735_5 | HRGMv2_2735_5_37 | 44999 | 46411 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_2735_5_28
Type: CAZyme
Location: 34087 - 35091 (-)
Type: CAZyme
Location: 34087 - 35091 (-)
Gene ID: HRGMv2_2735_5_29
Type:
Location: 35088 - 36644 (-)
Type:
Location: 35088 - 36644 (-)
Gene ID: HRGMv2_2735_5_30
Type: CAZyme
Location: 36650 - 37888 (-)
Type: CAZyme
Location: 36650 - 37888 (-)
Gene ID: HRGMv2_2735_5_31
Type: CAZyme
Location: 37888 - 38865 (-)
Type: CAZyme
Location: 37888 - 38865 (-)
Gene ID: HRGMv2_2735_5_32
Type: CAZyme
Location: 38992 - 40128 (-)
Type: CAZyme
Location: 38992 - 40128 (-)
Gene ID: HRGMv2_2735_5_33
Type: CAZyme
Location: 40138 - 40881 (-)
Type: CAZyme
Location: 40138 - 40881 (-)
Gene ID: HRGMv2_2735_5_34
Type: CAZyme
Location: 40924 - 42027 (-)
Type: CAZyme
Location: 40924 - 42027 (-)
Gene ID: HRGMv2_2735_5_35
Type: pfam
Location: 42050 - 43069 (-)
Type: pfam
Location: 42050 - 43069 (-)
Gene ID: HRGMv2_2735_5_36
Type: CAZyme
Location: 43217 - 44449 (-)
Type: CAZyme
Location: 43217 - 44449 (-)
Gene ID: HRGMv2_2735_5_37
Type: TC
Location: 44999 - 46411 (-)
Type: TC
Location: 44999 - 46411 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
SFJ001
Species
SFJ001 sp004555865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.