Cluster: HRGMv2_2735_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2735
- CGC Family ID: CGCFAM_00248
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2735_38 | HRGMv2_2735_38_12 | 13193 | 14152 | - | CE4 |
| pfam | HRGMv2_2735_38 | HRGMv2_2735_38_13 | 14483 | 14857 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | HRGMv2_2735_38 | HRGMv2_2735_38_14 | 14934 | 15446 | - | Ribosomal_L10 |
| TC | HRGMv2_2735_38 | HRGMv2_2735_38_15 | 15678 | 16373 | - | 1.C.82.1.1 |
Gene ID: HRGMv2_2735_38_12
Type: CAZyme
Location: 13193 - 14152 (-)
Type: CAZyme
Location: 13193 - 14152 (-)
Gene ID: HRGMv2_2735_38_13
Type: pfam
Location: 14483 - 14857 (-)
Type: pfam
Location: 14483 - 14857 (-)
Gene ID: HRGMv2_2735_38_14
Type: pfam
Location: 14934 - 15446 (-)
Type: pfam
Location: 14934 - 15446 (-)
Gene ID: HRGMv2_2735_38_15
Type: TC
Location: 15678 - 16373 (-)
Type: TC
Location: 15678 - 16373 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
SFJ001
Species
SFJ001 sp004555865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.