Cluster: HRGMv2_2727_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2727
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2727_3 | HRGMv2_2727_3_294 | 322090 | 323232 | - | GH105 |
| CAZyme | HRGMv2_2727_3 | HRGMv2_2727_3_295 | 323236 | 324792 | - | GH28 |
| TF | HRGMv2_2727_3 | HRGMv2_2727_3_296 | 324879 | 325700 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_297 | 325802 | 326659 | - | 3.A.1.1.11 |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_298 | 326671 | 327597 | - | 3.A.1.1.11 |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_299 | 327765 | 329141 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_2727_3_294
Type: CAZyme
Location: 322090 - 323232 (-)
Type: CAZyme
Location: 322090 - 323232 (-)
Gene ID: HRGMv2_2727_3_295
Type: CAZyme
Location: 323236 - 324792 (-)
Type: CAZyme
Location: 323236 - 324792 (-)
Gene ID: HRGMv2_2727_3_296
Type: TF
Location: 324879 - 325700 (+)
Type: TF
Location: 324879 - 325700 (+)
Gene ID: HRGMv2_2727_3_297
Type: TC
Location: 325802 - 326659 (-)
Type: TC
Location: 325802 - 326659 (-)
Gene ID: HRGMv2_2727_3_298
Type: TC
Location: 326671 - 327597 (-)
Type: TC
Location: 326671 - 327597 (-)
Gene ID: HRGMv2_2727_3_299
Type: TC
Location: 327765 - 329141 (-)
Type: TC
Location: 327765 - 329141 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.