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Cluster: HRGMv2_2727_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2727_3 HRGMv2_2727_3_90 89090 89794 + 3.A.1.122.7
TC HRGMv2_2727_3 HRGMv2_2727_3_91 89791 93111 + 3.A.1.137.2
pfam HRGMv2_2727_3 HRGMv2_2727_3_92 93179 93517 + RelE
TF HRGMv2_2727_3 HRGMv2_2727_3_93 93522 93833 + HTH_3
CAZyme HRGMv2_2727_3 HRGMv2_2727_3_94 93907 94653 - GT51
pfam HRGMv2_2727_3 HRGMv2_2727_3_95 94748 95482 - ABC2_membrane_4
pfam HRGMv2_2727_3 HRGMv2_2727_3_96 95487 96236 - ABC2_membrane_4
TC HRGMv2_2727_3 HRGMv2_2727_3_97 96238 97164 - 3.A.1.131.1
Gene ID: HRGMv2_2727_3_90
Type: TC
Location: 89090 - 89794 (+)
Gene ID: HRGMv2_2727_3_91
Type: TC
Location: 89791 - 93111 (+)
Gene ID: HRGMv2_2727_3_92
Type: pfam
Location: 93179 - 93517 (+)
Gene ID: HRGMv2_2727_3_93
Type: TF
Location: 93522 - 93833 (+)
Gene ID: HRGMv2_2727_3_94
Type: CAZyme
Location: 93907 - 94653 (-)
Gene ID: HRGMv2_2727_3_95
Type: pfam
Location: 94748 - 95482 (-)
Gene ID: HRGMv2_2727_3_96
Type: pfam
Location: 95487 - 96236 (-)
Gene ID: HRGMv2_2727_3_97
Type: TC
Location: 96238 - 97164 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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