dbCAN HGM

Cluster: HRGMv2_2727_CGC18

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2727_2	HRGMv2_2727_2_1101	1157055	1159451	+	GT35
CAZyme	HRGMv2_2727_2	HRGMv2_2727_2_1102	1159608	1161530	+	GH13_39
pfam	HRGMv2_2727_2	HRGMv2_2727_2_1103	1161677	1162126	+	NfeD
TC	HRGMv2_2727_2	HRGMv2_2727_2_1104	1162143	1163051	+	8.A.21.2.2
pfam	HRGMv2_2727_2	HRGMv2_2727_2_1105	1163063	1163539	+	DUF386
TF	HRGMv2_2727_2	HRGMv2_2727_2_1106	1163628	1164773	+	HTH_3
TC	HRGMv2_2727_2	HRGMv2_2727_2_1107	1164871	1166250	-	1.A.26.1.3
pfam	HRGMv2_2727_2	HRGMv2_2727_2_1108	1166585	1167235	-	ABC2_membrane_5
TC	HRGMv2_2727_2	HRGMv2_2727_2_1109	1167232	1168080	-	3.A.1.149.1
TF	HRGMv2_2727_2	HRGMv2_2727_2_1110	1168083	1168454	-	GntR
pfam	HRGMv2_2727_2	HRGMv2_2727_2_1111	1168595	1170034	-	tRNA-synt_2b \| HGTP_anticodon \| ProRS-C_1
TC	HRGMv2_2727_2	HRGMv2_2727_2_1112	1170167	1170400	-	3.D.1.6.3

Gene ID: HRGMv2_2727_2_1101
Type: CAZyme
Location: 1157055 - 1159451 (+)

Gene ID: HRGMv2_2727_2_1102
Type: CAZyme
Location: 1159608 - 1161530 (+)

Gene ID: HRGMv2_2727_2_1103
Type: pfam
Location: 1161677 - 1162126 (+)

Gene ID: HRGMv2_2727_2_1104
Type: TC
Location: 1162143 - 1163051 (+)

Gene ID: HRGMv2_2727_2_1105
Type: pfam
Location: 1163063 - 1163539 (+)

Gene ID: HRGMv2_2727_2_1106
Type: TF
Location: 1163628 - 1164773 (+)

Gene ID: HRGMv2_2727_2_1107
Type: TC
Location: 1164871 - 1166250 (-)

Gene ID: HRGMv2_2727_2_1108
Type: pfam
Location: 1166585 - 1167235 (-)

Gene ID: HRGMv2_2727_2_1109
Type: TC
Location: 1167232 - 1168080 (-)

Gene ID: HRGMv2_2727_2_1110
Type: TF
Location: 1168083 - 1168454 (-)

Gene ID: HRGMv2_2727_2_1111
Type: pfam
Location: 1168595 - 1170034 (-)

Gene ID: HRGMv2_2727_2_1112
Type: TC
Location: 1170167 - 1170400 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.