Cluster: HRGMv2_2727_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2727
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2727_2 | HRGMv2_2727_2_959 | 988870 | 990033 | + | 2.A.1.60.3 |
| NULL(UNKNOWN) | HRGMv2_2727_2 | HRGMv2_2727_2_960 | 990060 | 990311 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2727_2 | HRGMv2_2727_2_961 | 990410 | 990787 | - | bPH_1 |
| CAZyme | HRGMv2_2727_2 | HRGMv2_2727_2_962 | 990973 | 993327 | - | GH3 |
Gene ID: HRGMv2_2727_2_959
Type: TC
Location: 988870 - 990033 (+)
Type: TC
Location: 988870 - 990033 (+)
Gene ID: HRGMv2_2727_2_960
Type:
Location: 990060 - 990311 (+)
Type:
Location: 990060 - 990311 (+)
Gene ID: HRGMv2_2727_2_961
Type: pfam
Location: 990410 - 990787 (-)
Type: pfam
Location: 990410 - 990787 (-)
Gene ID: HRGMv2_2727_2_962
Type: CAZyme
Location: 990973 - 993327 (-)
Type: CAZyme
Location: 990973 - 993327 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.