dbCAN Logo

Cluster: HRGMv2_2727_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2727_2 HRGMv2_2727_2_352 378445 379917 - GH77
TC HRGMv2_2727_2 HRGMv2_2727_2_353 379933 380775 - 3.A.1.1.45
TC HRGMv2_2727_2 HRGMv2_2727_2_354 380775 381626 - 3.A.1.1.45
TC HRGMv2_2727_2 HRGMv2_2727_2_355 381716 383062 - 3.A.1.1.45
TF HRGMv2_2727_2 HRGMv2_2727_2_356 383119 384138 - LacI
pfam HRGMv2_2727_2 HRGMv2_2727_2_357 384566 384823 - Ribosomal_S18
TC HRGMv2_2727_2 HRGMv2_2727_2_358 384869 385348 - 3.A.7.19.1
pfam HRGMv2_2727_2 HRGMv2_2727_2_359 385379 385663 - Ribosomal_S6
TC HRGMv2_2727_2 HRGMv2_2727_2_360 385988 387184 + 2.A.37.2.2
Gene ID: HRGMv2_2727_2_352
Type: CAZyme
Location: 378445 - 379917 (-)
Gene ID: HRGMv2_2727_2_353
Type: TC
Location: 379933 - 380775 (-)
Gene ID: HRGMv2_2727_2_354
Type: TC
Location: 380775 - 381626 (-)
Gene ID: HRGMv2_2727_2_355
Type: TC
Location: 381716 - 383062 (-)
Gene ID: HRGMv2_2727_2_356
Type: TF
Location: 383119 - 384138 (-)
Gene ID: HRGMv2_2727_2_357
Type: pfam
Location: 384566 - 384823 (-)
Gene ID: HRGMv2_2727_2_358
Type: TC
Location: 384869 - 385348 (-)
Gene ID: HRGMv2_2727_2_359
Type: pfam
Location: 385379 - 385663 (-)
Gene ID: HRGMv2_2727_2_360
Type: TC
Location: 385988 - 387184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List