Cluster: HRGMv2_2723_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2723
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2723_4 | HRGMv2_2723_4_54 | 55415 | 56521 | - | GH18 |
| STP | HRGMv2_2723_4 | HRGMv2_2723_4_55 | 56518 | 57435 | - | HhH-GPD |
| TC | HRGMv2_2723_4 | HRGMv2_2723_4_56 | 57469 | 59340 | - | 3.A.18.1.1 |
| TF | HRGMv2_2723_4 | HRGMv2_2723_4_57 | 59617 | 60003 | + | Pencillinase_R |
| TC | HRGMv2_2723_4 | HRGMv2_2723_4_58 | 60123 | 63071 | - | 3.A.3.5.23 |
Gene ID: HRGMv2_2723_4_54
Type: CAZyme
Location: 55415 - 56521 (-)
Type: CAZyme
Location: 55415 - 56521 (-)
Gene ID: HRGMv2_2723_4_55
Type: STP
Location: 56518 - 57435 (-)
Type: STP
Location: 56518 - 57435 (-)
Gene ID: HRGMv2_2723_4_56
Type: TC
Location: 57469 - 59340 (-)
Type: TC
Location: 57469 - 59340 (-)
Gene ID: HRGMv2_2723_4_57
Type: TF
Location: 59617 - 60003 (+)
Type: TF
Location: 59617 - 60003 (+)
Gene ID: HRGMv2_2723_4_58
Type: TC
Location: 60123 - 63071 (-)
Type: TC
Location: 60123 - 63071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.