Cluster: HRGMv2_2723_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2723
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2723_4 | HRGMv2_2723_4_44 | 41175 | 42008 | - | GT8 |
| TC | HRGMv2_2723_4 | HRGMv2_2723_4_45 | 42165 | 43919 | + | 3.A.1.135.5 |
| TC | HRGMv2_2723_4 | HRGMv2_2723_4_46 | 43919 | 45670 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2723_4 | HRGMv2_2723_4_47 | 46135 | 47784 | + | CBS | CBS | DHH | DHHA2 | DRTGG |
| NULL(UNKNOWN) | HRGMv2_2723_4 | HRGMv2_2723_4_48 | 47865 | 48326 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2723_4 | HRGMv2_2723_4_49 | 48783 | 50279 | + | 3.A.1.121.3 |
Gene ID: HRGMv2_2723_4_44
Type: CAZyme
Location: 41175 - 42008 (-)
Type: CAZyme
Location: 41175 - 42008 (-)
Gene ID: HRGMv2_2723_4_45
Type: TC
Location: 42165 - 43919 (+)
Type: TC
Location: 42165 - 43919 (+)
Gene ID: HRGMv2_2723_4_46
Type: TC
Location: 43919 - 45670 (+)
Type: TC
Location: 43919 - 45670 (+)
Gene ID: HRGMv2_2723_4_47
Type: pfam
Location: 46135 - 47784 (+)
Type: pfam
Location: 46135 - 47784 (+)
Gene ID: HRGMv2_2723_4_48
Type:
Location: 47865 - 48326 (-)
Type:
Location: 47865 - 48326 (-)
Gene ID: HRGMv2_2723_4_49
Type: TC
Location: 48783 - 50279 (+)
Type: TC
Location: 48783 - 50279 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.