Cluster: HRGMv2_2723_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2723
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2723_3 | HRGMv2_2723_3_48 | 50777 | 51742 | - | GT2 |
| STP | HRGMv2_2723_3 | HRGMv2_2723_3_49 | 51767 | 53239 | - | B12-binding |
| CAZyme | HRGMv2_2723_3 | HRGMv2_2723_3_50 | 53267 | 54166 | - | GT2 |
| pfam | HRGMv2_2723_3 | HRGMv2_2723_3_51 | 54130 | 54882 | - | CpsB_CapC |
| NULL(UNKNOWN) | HRGMv2_2723_3 | HRGMv2_2723_3_52 | 54879 | 55196 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2723_3 | HRGMv2_2723_3_53 | 55198 | 55650 | - | 8.A.3.3.3 |
Gene ID: HRGMv2_2723_3_48
Type: CAZyme
Location: 50777 - 51742 (-)
Type: CAZyme
Location: 50777 - 51742 (-)
Gene ID: HRGMv2_2723_3_49
Type: STP
Location: 51767 - 53239 (-)
Type: STP
Location: 51767 - 53239 (-)
Gene ID: HRGMv2_2723_3_50
Type: CAZyme
Location: 53267 - 54166 (-)
Type: CAZyme
Location: 53267 - 54166 (-)
Gene ID: HRGMv2_2723_3_51
Type: pfam
Location: 54130 - 54882 (-)
Type: pfam
Location: 54130 - 54882 (-)
Gene ID: HRGMv2_2723_3_52
Type:
Location: 54879 - 55196 (-)
Type:
Location: 54879 - 55196 (-)
Gene ID: HRGMv2_2723_3_53
Type: TC
Location: 55198 - 55650 (-)
Type: TC
Location: 55198 - 55650 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.