Cluster: HRGMv2_2721_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2721
- CGC Family ID: CGCFAM_04385
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2721_2 | HRGMv2_2721_2_109 | 135274 | 136647 | - | 2.A.66.1.25 |
| NULL(UNKNOWN) | HRGMv2_2721_2 | HRGMv2_2721_2_110 | 136777 | 138150 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2721_2 | HRGMv2_2721_2_111 | 138368 | 139225 | + | HTH_6 |
| CAZyme | HRGMv2_2721_2 | HRGMv2_2721_2_112 | 139397 | 140653 | + | CE4 |
| TC | HRGMv2_2721_2 | HRGMv2_2721_2_113 | 140814 | 142262 | + | 2.A.46.1.8 |
Gene ID: HRGMv2_2721_2_109
Type: TC
Location: 135274 - 136647 (-)
Type: TC
Location: 135274 - 136647 (-)
Gene ID: HRGMv2_2721_2_110
Type:
Location: 136777 - 138150 (-)
Type:
Location: 136777 - 138150 (-)
Gene ID: HRGMv2_2721_2_111
Type: TF
Location: 138368 - 139225 (+)
Type: TF
Location: 138368 - 139225 (+)
Gene ID: HRGMv2_2721_2_112
Type: CAZyme
Location: 139397 - 140653 (+)
Type: CAZyme
Location: 139397 - 140653 (+)
Gene ID: HRGMv2_2721_2_113
Type: TC
Location: 140814 - 142262 (+)
Type: TC
Location: 140814 - 142262 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp900757695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.