PROTEIN: HRGMv2_2721_2_110
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Protein File & Metadata
Source:
HRGMv2_2721_2_110.pdb
Genome ID:
Protein ID:
HRGMv2_2721_2_110
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Protein Sequence
MGTGKFVTVY PGVWTEREKP YAEEYFAKIK ELEDRGPIDV QALISGKIEK GTQGFSNVLE 60 VKEDMMVYNA KKYDPDNKLY TDDEYAKSLG FDGKIAMPAF AAHDDSFLTA FNGKARDFLA 120 VTGLHHEVEQ LLPVYAGDTL YLVKDKLELI DLTPKEGSIY RNLVLKCTGS VYNQKGEKVL 180 GVMFSARENL KSYEDPADMG NQRGWESPDW WTRPVHYYTD ADWQQIFDTW AKEDYRGDKP 240 LYWEDVNVGD MPNVTIDGPI HASCSPTPPY GMAVGGSRTM KELADPEVRA KMTRDPKYGV 300 YVPEDMKEWD PEVPPYDDPR AKMGPPPDMP KEEKRSIFIN FLGRDFAIHH INNWMGTHGW 360 IQNIRWGIMT NPTEQGFCFP KNTAVSEMIE KIPAMAGKKC NTHGLQYDVM KIHSQVYDKY 420 EKDGKHYVEL GFWITTINDD EIYEEGGATI LLPSKNA 457
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EYL0-F1-model_v4 | 10 | 457 | 2 | 339 | 0.6207 |
0.7255 |
| AF-K0F2V3-F1-model_v4 | 16 | 453 | 3 | 355 | 0.6118 |
0.7035 |
| AF-K0EP48-F1-model_v4 | 4 | 457 | 1 | 293 | 0.6116 |
0.7572 |
| AF-K0FDB9-F1-model_v4 | 16 | 453 | 14 | 356 | 0.6099 |
0.7213 |
| AF-K0EVJ0-F1-model_v4 | 15 | 453 | 1 | 344 | 0.6096 |
0.7067 |
| AF-K0F8D0-F1-model_v4 | 10 | 453 | 11 | 357 | 0.6042 |
0.7073 |
| AF-K0EPR5-F1-model_v4 | 6 | 452 | 6 | 292 | 0.6028 |
0.7573 |
| AF-A0A044R0J9-F1-model_v4 | 21 | 456 | 1 | 286 | 0.5945 |
0.7506 |
| AF-A0A1D8PLR8-F1-model_v4 | 4 | 454 | 1 | 291 | 0.5939 |
0.737 |
| AF-I1K7F5-F1-model_v4 | 15 | 456 | 2 | 307 | 0.5919 |
0.7219 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5i7n-assembly1.cif.gz_A-2 | 12 | 453 | 1 | 325 | 0.6136 |
0.7284 |
| 4v12-assembly1.cif.gz_A-2 | 19 | 453 | 1 | 337 | 0.6112 |
0.7145 |
| 4e3e-assembly1.cif.gz_A | 20 | 456 | 8 | 351 | 0.6008 |
0.705 |
| 3khp-assembly1.cif.gz_A | 6 | 452 | 1 | 288 | 0.5911 |
0.7358 |
| 3kh8-assembly1.cif.gz_B | 22 | 454 | 1 | 284 | 0.5893 |
0.7366 |
| 3khp-assembly3.cif.gz_D | 21 | 453 | 1 | 267 | 0.5888 |
0.7541 |
| 8hgn-assembly1.cif.gz_A | 20 | 457 | 7 | 350 | 0.588 |
0.6921 |
| 1s9c-assembly3.cif.gz_F | 22 | 451 | 1 | 276 | 0.584 |
0.7381 |
| 2bi0-assembly1.cif.gz_A | 20 | 453 | 6 | 330 | 0.5821 |
0.6984 |
| 7mku-assembly1.cif.gz_B | 19 | 455 | 1 | 301 | 0.5814 |
0.7113 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A9WC41-F1-model_v4 | 18 | 452 | 1 | 280 | 0.6002 |
0.7553 |
| AF-A9WC34-F1-model_v4 | 20 | 456 | 9 | 352 | 0.6 |
0.7051 |
| AF-Q3IZ78-F1-model_v4 | 20 | 454 | 7 | 343 | 0.5976 |
0.7057 |
| AF-Q8VYI3-F1-model_v4 | 15 | 457 | 3 | 309 | 0.5813 |
0.7086 |
| AF-Q5V464-F1-model_v4 | 20 | 456 | 32 | 358 | 0.5808 |
0.7197 |
| AF-G0HQ35-F1-model_v4 | 20 | 456 | 32 | 358 | 0.5786 |
0.7173 |
| AF-Q9Y814-F1-model_v4 | 26 | 451 | 1 | 300 | 0.5561 |
0.6821 |
| AF-Q9VXJ0-F1-model_v4 | 31 | 455 | 262 | 596 | 0.424 |
0.645 |
| AF-P51659-F1-model_v4 | 14 | 457 | 316 | 612 | 0.3937 |
0.7212 |
| AF-P97852-F1-model_v4 | 15 | 457 | 315 | 611 | 0.3934 |
0.721 |