Cluster: HRGMv2_2720_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- CGC Family ID: CGCFAM_10157
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_214 | 248344 | 250698 | + | 3.A.9.1.2 |
| pfam | HRGMv2_2720_2 | HRGMv2_2720_2_215 | 250797 | 251666 | + | DegV |
| CAZyme | HRGMv2_2720_2 | HRGMv2_2720_2_216 | 251709 | 253679 | - | CBM2 | GH5_1 |
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_217 | 253890 | 256049 | - | 9.B.34.1.3 |
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_218 | 256699 | 259329 | - | 4.A.2.1.17 |
Gene ID: HRGMv2_2720_2_214
Type: TC
Location: 248344 - 250698 (+)
Type: TC
Location: 248344 - 250698 (+)
Gene ID: HRGMv2_2720_2_215
Type: pfam
Location: 250797 - 251666 (+)
Type: pfam
Location: 250797 - 251666 (+)
Gene ID: HRGMv2_2720_2_216
Type: CAZyme
Location: 251709 - 253679 (-)
Type: CAZyme
Location: 251709 - 253679 (-)
Gene ID: HRGMv2_2720_2_217
Type: TC
Location: 253890 - 256049 (-)
Type: TC
Location: 253890 - 256049 (-)
Gene ID: HRGMv2_2720_2_218
Type: TC
Location: 256699 - 259329 (-)
Type: TC
Location: 256699 - 259329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.