Cluster: HRGMv2_2720_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_175 | 208119 | 208853 | - | 3.A.1.103.1 |
| pfam | HRGMv2_2720_2 | HRGMv2_2720_2_176 | 208881 | 209735 | - | ABC2_membrane |
| pfam | HRGMv2_2720_2 | HRGMv2_2720_2_177 | 209741 | 210865 | - | Glyphos_transf |
| CAZyme | HRGMv2_2720_2 | HRGMv2_2720_2_178 | 210865 | 211701 | - | GT2 |
Gene ID: HRGMv2_2720_2_175
Type: TC
Location: 208119 - 208853 (-)
Type: TC
Location: 208119 - 208853 (-)
Gene ID: HRGMv2_2720_2_176
Type: pfam
Location: 208881 - 209735 (-)
Type: pfam
Location: 208881 - 209735 (-)
Gene ID: HRGMv2_2720_2_177
Type: pfam
Location: 209741 - 210865 (-)
Type: pfam
Location: 209741 - 210865 (-)
Gene ID: HRGMv2_2720_2_178
Type: CAZyme
Location: 210865 - 211701 (-)
Type: CAZyme
Location: 210865 - 211701 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.