Cluster: HRGMv2_2720_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_88 | 103995 | 104324 | - | 2.A.78.1.1 |
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_89 | 104321 | 105046 | - | 2.A.78.1.1 |
| STP | HRGMv2_2720_2 | HRGMv2_2720_2_90 | 105146 | 106045 | - | PfkB |
| CAZyme | HRGMv2_2720_2 | HRGMv2_2720_2_91 | 106115 | 107194 | - | GT4 |
Gene ID: HRGMv2_2720_2_88
Type: TC
Location: 103995 - 104324 (-)
Type: TC
Location: 103995 - 104324 (-)
Gene ID: HRGMv2_2720_2_89
Type: TC
Location: 104321 - 105046 (-)
Type: TC
Location: 104321 - 105046 (-)
Gene ID: HRGMv2_2720_2_90
Type: STP
Location: 105146 - 106045 (-)
Type: STP
Location: 105146 - 106045 (-)
Gene ID: HRGMv2_2720_2_91
Type: CAZyme
Location: 106115 - 107194 (-)
Type: CAZyme
Location: 106115 - 107194 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.