Cluster: HRGMv2_2720_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2720
- CGC Family ID: CGCFAM_00005
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_17 | HRGMv2_2720_17_7 | 6608 | 7291 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2720_17 | HRGMv2_2720_17_8 | 7303 | 8307 | + | GT2 |
| pfam | HRGMv2_2720_17 | HRGMv2_2720_17_9 | 8330 | 9775 | + | O-ag_pol_Wzy |
| CAZyme | HRGMv2_2720_17 | HRGMv2_2720_17_10 | 9833 | 10936 | + | GT4 |
Gene ID: HRGMv2_2720_17_7
Type: TC
Location: 6608 - 7291 (+)
Type: TC
Location: 6608 - 7291 (+)
Gene ID: HRGMv2_2720_17_8
Type: CAZyme
Location: 7303 - 8307 (+)
Type: CAZyme
Location: 7303 - 8307 (+)
Gene ID: HRGMv2_2720_17_9
Type: pfam
Location: 8330 - 9775 (+)
Type: pfam
Location: 8330 - 9775 (+)
Gene ID: HRGMv2_2720_17_10
Type: CAZyme
Location: 9833 - 10936 (+)
Type: CAZyme
Location: 9833 - 10936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.