Cluster: HRGMv2_2720_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2720_16 | HRGMv2_2720_16_1 | 354 | 2108 | - | GH26 |
| CAZyme | HRGMv2_2720_16 | HRGMv2_2720_16_2 | 2142 | 4421 | - | GH95 |
| NULL(UNKNOWN) | HRGMv2_2720_16 | HRGMv2_2720_16_3 | 4607 | 5074 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2720_16 | HRGMv2_2720_16_4 | 5278 | 5658 | + | HAMP |
| TC | HRGMv2_2720_16 | HRGMv2_2720_16_5 | 6230 | 7660 | + | 1.A.26.1.1 |
Gene ID: HRGMv2_2720_16_1
Type: CAZyme
Location: 354 - 2108 (-)
Type: CAZyme
Location: 354 - 2108 (-)
Gene ID: HRGMv2_2720_16_2
Type: CAZyme
Location: 2142 - 4421 (-)
Type: CAZyme
Location: 2142 - 4421 (-)
Gene ID: HRGMv2_2720_16_3
Type:
Location: 4607 - 5074 (+)
Type:
Location: 4607 - 5074 (+)
Gene ID: HRGMv2_2720_16_4
Type: pfam
Location: 5278 - 5658 (+)
Type: pfam
Location: 5278 - 5658 (+)
Gene ID: HRGMv2_2720_16_5
Type: TC
Location: 6230 - 7660 (+)
Type: TC
Location: 6230 - 7660 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.