Cluster: HRGMv2_2720_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- CGC Family ID: CGCFAM_10156
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2720_13 | HRGMv2_2720_13_39 | 43606 | 45717 | - | GH36 |
| pfam | HRGMv2_2720_13 | HRGMv2_2720_13_40 | 45764 | 46957 | - | Flavoprotein | DFP |
| NULL(UNKNOWN) | HRGMv2_2720_13 | HRGMv2_2720_13_41 | 47040 | 47459 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2720_13 | HRGMv2_2720_13_42 | 47896 | 48336 | - | 1.A.22.1.3 |
Gene ID: HRGMv2_2720_13_39
Type: CAZyme
Location: 43606 - 45717 (-)
Type: CAZyme
Location: 43606 - 45717 (-)
Gene ID: HRGMv2_2720_13_40
Type: pfam
Location: 45764 - 46957 (-)
Type: pfam
Location: 45764 - 46957 (-)
Gene ID: HRGMv2_2720_13_41
Type:
Location: 47040 - 47459 (+)
Type:
Location: 47040 - 47459 (+)
Gene ID: HRGMv2_2720_13_42
Type: TC
Location: 47896 - 48336 (-)
Type: TC
Location: 47896 - 48336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.