Cluster: HRGMv2_2720_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_9 | HRGMv2_2720_9_9 | 12124 | 13683 | + | 2.A.21.2.5 |
| CAZyme | HRGMv2_2720_9 | HRGMv2_2720_9_10 | 14133 | 15650 | - | CBM91 | GH43_12 |
| pfam | HRGMv2_2720_9 | HRGMv2_2720_9_11 | 16048 | 18216 | + | Big_2 | CHAP |
| CAZyme | HRGMv2_2720_9 | HRGMv2_2720_9_12 | 18498 | 19808 | - | GH13_20 |
Gene ID: HRGMv2_2720_9_9
Type: TC
Location: 12124 - 13683 (+)
Type: TC
Location: 12124 - 13683 (+)
Gene ID: HRGMv2_2720_9_10
Type: CAZyme
Location: 14133 - 15650 (-)
Type: CAZyme
Location: 14133 - 15650 (-)
Gene ID: HRGMv2_2720_9_11
Type: pfam
Location: 16048 - 18216 (+)
Type: pfam
Location: 16048 - 18216 (+)
Gene ID: HRGMv2_2720_9_12
Type: CAZyme
Location: 18498 - 19808 (-)
Type: CAZyme
Location: 18498 - 19808 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.