Cluster: HRGMv2_2720_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- CGC Family ID: CGCFAM_07998
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2720_8 | HRGMv2_2720_8_3 | 1734 | 3812 | + | GH3 |
| TC | HRGMv2_2720_8 | HRGMv2_2720_8_4 | 3809 | 5149 | + | 2.A.66.1.33 |
| TC | HRGMv2_2720_8 | HRGMv2_2720_8_5 | 5177 | 5812 | + | 2.A.115.2.8 |
| TC | HRGMv2_2720_8 | HRGMv2_2720_8_6 | 6024 | 7526 | + | 8.A.3.3.1 |
| pfam | HRGMv2_2720_8 | HRGMv2_2720_8_7 | 7548 | 8252 | + | CpsB_CapC |
| TC | HRGMv2_2720_8 | HRGMv2_2720_8_8 | 8357 | 10474 | + | 9.B.18.2.1 |
Gene ID: HRGMv2_2720_8_3
Type: CAZyme
Location: 1734 - 3812 (+)
Type: CAZyme
Location: 1734 - 3812 (+)
Gene ID: HRGMv2_2720_8_4
Type: TC
Location: 3809 - 5149 (+)
Type: TC
Location: 3809 - 5149 (+)
Gene ID: HRGMv2_2720_8_5
Type: TC
Location: 5177 - 5812 (+)
Type: TC
Location: 5177 - 5812 (+)
Gene ID: HRGMv2_2720_8_6
Type: TC
Location: 6024 - 7526 (+)
Type: TC
Location: 6024 - 7526 (+)
Gene ID: HRGMv2_2720_8_7
Type: pfam
Location: 7548 - 8252 (+)
Type: pfam
Location: 7548 - 8252 (+)
Gene ID: HRGMv2_2720_8_8
Type: TC
Location: 8357 - 10474 (+)
Type: TC
Location: 8357 - 10474 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.