Cluster: HRGMv2_2720_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_54 | 69654 | 71489 | - | 3.A.1.135.5 |
| TC | HRGMv2_2720_2 | HRGMv2_2720_2_55 | 71489 | 73222 | - | 3.A.1.135.5 |
| CAZyme | HRGMv2_2720_2 | HRGMv2_2720_2_56 | 73463 | 75934 | - | GH2 |
Gene ID: HRGMv2_2720_2_54
Type: TC
Location: 69654 - 71489 (-)
Type: TC
Location: 69654 - 71489 (-)
Gene ID: HRGMv2_2720_2_55
Type: TC
Location: 71489 - 73222 (-)
Type: TC
Location: 71489 - 73222 (-)
Gene ID: HRGMv2_2720_2_56
Type: CAZyme
Location: 73463 - 75934 (-)
Type: CAZyme
Location: 73463 - 75934 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.