Cluster: HRGMv2_2720_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2720_6 | HRGMv2_2720_6_69 | 67503 | 69314 | + | GH146 |
| TF | HRGMv2_2720_6 | HRGMv2_2720_6_70 | 69437 | 70273 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2720_6 | HRGMv2_2720_6_71 | 70422 | 71381 | - | 3.A.1.2.17 |
| TC | HRGMv2_2720_6 | HRGMv2_2720_6_72 | 71374 | 72480 | - | 3.A.1.2.12 |
| TC | HRGMv2_2720_6 | HRGMv2_2720_6_73 | 72473 | 74008 | - | 3.A.1.2.17 |
Gene ID: HRGMv2_2720_6_69
Type: CAZyme
Location: 67503 - 69314 (+)
Type: CAZyme
Location: 67503 - 69314 (+)
Gene ID: HRGMv2_2720_6_70
Type: TF
Location: 69437 - 70273 (-)
Type: TF
Location: 69437 - 70273 (-)
Gene ID: HRGMv2_2720_6_71
Type: TC
Location: 70422 - 71381 (-)
Type: TC
Location: 70422 - 71381 (-)
Gene ID: HRGMv2_2720_6_72
Type: TC
Location: 71374 - 72480 (-)
Type: TC
Location: 71374 - 72480 (-)
Gene ID: HRGMv2_2720_6_73
Type: TC
Location: 72473 - 74008 (-)
Type: TC
Location: 72473 - 74008 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.