Cluster: HRGMv2_2720_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_6 | HRGMv2_2720_6_23 | 15884 | 16696 | + | 3.A.25.2.1 |
| peptidase | HRGMv2_2720_6 | HRGMv2_2720_6_24 | 16693 | 17103 | + | M67.UPB |
| CAZyme | HRGMv2_2720_6 | HRGMv2_2720_6_25 | 17346 | 18623 | - | GH5_4 |
| TC | HRGMv2_2720_6 | HRGMv2_2720_6_26 | 18899 | 20068 | + | 2.A.4.7.4 |
Gene ID: HRGMv2_2720_6_23
Type: TC
Location: 15884 - 16696 (+)
Type: TC
Location: 15884 - 16696 (+)
Gene ID: HRGMv2_2720_6_24
Type: peptidase
Location: 16693 - 17103 (+)
Type: peptidase
Location: 16693 - 17103 (+)
Gene ID: HRGMv2_2720_6_25
Type: CAZyme
Location: 17346 - 18623 (-)
Type: CAZyme
Location: 17346 - 18623 (-)
Gene ID: HRGMv2_2720_6_26
Type: TC
Location: 18899 - 20068 (+)
Type: TC
Location: 18899 - 20068 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.