Cluster: HRGMv2_2720_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_4 | HRGMv2_2720_4_126 | 147957 | 148781 | - | 1.A.54.5.3 |
| TC | HRGMv2_2720_4 | HRGMv2_2720_4_127 | 148943 | 150622 | + | 3.A.11.1.3 |
| TC | HRGMv2_2720_4 | HRGMv2_2720_4_128 | 150650 | 151720 | + | 3.A.15.2.1 |
| pfam | HRGMv2_2720_4 | HRGMv2_2720_4_129 | 151790 | 152674 | - | EamA | EamA |
| pfam | HRGMv2_2720_4 | HRGMv2_2720_4_130 | 152661 | 153065 | - | DUF3783 |
| CAZyme | HRGMv2_2720_4 | HRGMv2_2720_4_131 | 153223 | 155565 | - | GH31_3 |
Gene ID: HRGMv2_2720_4_126
Type: TC
Location: 147957 - 148781 (-)
Type: TC
Location: 147957 - 148781 (-)
Gene ID: HRGMv2_2720_4_127
Type: TC
Location: 148943 - 150622 (+)
Type: TC
Location: 148943 - 150622 (+)
Gene ID: HRGMv2_2720_4_128
Type: TC
Location: 150650 - 151720 (+)
Type: TC
Location: 150650 - 151720 (+)
Gene ID: HRGMv2_2720_4_129
Type: pfam
Location: 151790 - 152674 (-)
Type: pfam
Location: 151790 - 152674 (-)
Gene ID: HRGMv2_2720_4_130
Type: pfam
Location: 152661 - 153065 (-)
Type: pfam
Location: 152661 - 153065 (-)
Gene ID: HRGMv2_2720_4_131
Type: CAZyme
Location: 153223 - 155565 (-)
Type: CAZyme
Location: 153223 - 155565 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.