Cluster: HRGMv2_2720_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2720
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2720_4 | HRGMv2_2720_4_38 | 41290 | 41805 | - | 9.B.156.3.1 |
| TC | HRGMv2_2720_4 | HRGMv2_2720_4_39 | 41792 | 42361 | - | 9.B.156.3.1 |
| TF | HRGMv2_2720_4 | HRGMv2_2720_4_40 | 42569 | 42817 | + | SpoVT_AbrB |
| CAZyme | HRGMv2_2720_4 | HRGMv2_2720_4_41 | 42931 | 43794 | - | GH25 |
Gene ID: HRGMv2_2720_4_38
Type: TC
Location: 41290 - 41805 (-)
Type: TC
Location: 41290 - 41805 (-)
Gene ID: HRGMv2_2720_4_39
Type: TC
Location: 41792 - 42361 (-)
Type: TC
Location: 41792 - 42361 (-)
Gene ID: HRGMv2_2720_4_40
Type: TF
Location: 42569 - 42817 (+)
Type: TF
Location: 42569 - 42817 (+)
Gene ID: HRGMv2_2720_4_41
Type: CAZyme
Location: 42931 - 43794 (-)
Type: CAZyme
Location: 42931 - 43794 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp900539095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.