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Cluster: HRGMv2_2717_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2717_1 HRGMv2_2717_1_70 81279 82238 - GT2
NULL(UNKNOWN) HRGMv2_2717_1 HRGMv2_2717_1_71 82334 83806 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2717_1 HRGMv2_2717_1_72 83818 85224 - PS_pyruv_trans
CAZyme HRGMv2_2717_1 HRGMv2_2717_1_73 85247 86497 - GT2
CAZyme HRGMv2_2717_1 HRGMv2_2717_1_74 86463 87428 - GT2
CAZyme HRGMv2_2717_1 HRGMv2_2717_1_75 87469 89712 - GT2 | GT4
CAZyme HRGMv2_2717_1 HRGMv2_2717_1_76 89734 90543 - GT2
pfam HRGMv2_2717_1 HRGMv2_2717_1_77 90571 91587 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd
pfam HRGMv2_2717_1 HRGMv2_2717_1_78 91601 92458 - NTP_transferase | NTP_transf_3
TC HRGMv2_2717_1 HRGMv2_2717_1_79 92504 93286 - 3.A.1.103.1
Gene ID: HRGMv2_2717_1_70
Type: CAZyme
Location: 81279 - 82238 (-)
Gene ID: HRGMv2_2717_1_71
Type:
Location: 82334 - 83806 (-)
Gene ID: HRGMv2_2717_1_72
Type: pfam
Location: 83818 - 85224 (-)
Gene ID: HRGMv2_2717_1_73
Type: CAZyme
Location: 85247 - 86497 (-)
Gene ID: HRGMv2_2717_1_74
Type: CAZyme
Location: 86463 - 87428 (-)
Gene ID: HRGMv2_2717_1_75
Type: CAZyme
Location: 87469 - 89712 (-)
Gene ID: HRGMv2_2717_1_76
Type: CAZyme
Location: 89734 - 90543 (-)
Gene ID: HRGMv2_2717_1_77
Type: pfam
Location: 90571 - 91587 (-)
Gene ID: HRGMv2_2717_1_78
Type: pfam
Location: 91601 - 92458 (-)
Gene ID: HRGMv2_2717_1_79
Type: TC
Location: 92504 - 93286 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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