PROTEIN: HRGMv2_2717_1_71
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Protein File & Metadata
Source:
HRGMv2_2717_1_71.pdb
Genome ID:
Protein ID:
HRGMv2_2717_1_71
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Protein Sequence
MVKKYSRKEH ILLIGFSTII FLSMLLFFLR IHPLIIYDAD DWLYASYFRL PIPIWNDWNP 60 SRVFPEIFMP LCSTLAVYLF MPLTHDYIWS LALMYGIVVS SFITLYVYAF ALFLREKIKA 120 SVSNSIIIST FFFLFHFLIF KTSESGNHHM FYANDVTCYF YYIIPTILNV VLVIILELYP 180 DLMDIFSRKN GILKGVILFS VYMAIFSNMF CSVIIAVWAG VEIINSSLNL IICKDFKFKT 240 ILKNNIYKVM IVLGWLISII YELSGGRAES LAGISFAESV KHTIRNFTQV LIGVNKYVAV 300 LLVCVIILYF MLIRNKKQSR YILIALANAA IIGVFLILAC AKSNAYYITR TEILLALCFW 360 VFAAIGIMMT ALINNKAIRI LSPCILLLLC ASINSHGITF ADANCGDVDW KTCYDISSDF 420 VEQIEVADDD NKMNIVLKVP QYDDAQNWPL AIYGEDRICY TLYKHGIVSH DLNVVFEPDN 480 SINQKWGITS 490
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZKK1-F1-model_v4 | 11 | 487 | 8 | 502 | 0.6708 |
0.7226 |
| AF-Q8ZR61-F1-model_v4 | 3 | 489 | 2 | 514 | 0.6593 |
0.7165 |
| AF-Q2FXN8-F1-model_v4 | 7 | 490 | 4 | 495 | 0.636 |
0.6673 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G8P9R0-F1-model_v4 | GT83 | 1 | 490 | 12 | 504 | 0.6605 |
0.695 |
| AF-A0A7T5CJ27-F1-model_v4 | GT83 | 7 | 490 | 3 | 477 | 0.6602 |
0.6997 |
| A0A8D5JSU7 | GT83 | 5 | 490 | 2 | 482 | 0.6601 |
0.6956 |
| AF-F2LXI8-F1-model_v4 | GT83 | 3 | 482 | 5 | 422 | 0.6589 |
0.74 |
| AF-A0A6N0HZZ0-F1-model_v4 | GT83 | 3 | 479 | 4 | 443 | 0.6585 |
0.732 |
| A0A9Q4LCB9 | GT83 | 1 | 490 | 3 | 476 | 0.6562 |
0.7013 |
| AF-A0A098GG68-F1-model_v4 | GT83 | 6 | 490 | 9 | 463 | 0.6559 |
0.714 |
| AF-A0A517YV87-F1-model_v4 | GT83 | 7 | 490 | 3 | 479 | 0.6558 |
0.6941 |
| AF-A0A1W6PPW7-F1-model_v4 | GT83 | 4 | 490 | 1 | 484 | 0.6537 |
0.6877 |
| A0A8J2V5Q9 | GT83 | 7 | 490 | 12 | 494 | 0.6532 |
0.7005 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8D5JSU7 | GT83 | 5 | 490 | 2 | 482 | 0.6601 |
0.6956 |
| F2LXI8 | GT83 | 3 | 482 | 5 | 422 | 0.6589 |
0.74 |
| A0A6N0HZZ0 | GT83 | 3 | 479 | 4 | 443 | 0.6585 |
0.732 |
| A0A9Q4LCB9 | GT83 | 1 | 490 | 3 | 476 | 0.6562 |
0.7013 |
| A0A098GG68 | GT83 | 6 | 490 | 9 | 463 | 0.6559 |
0.714 |
| A0A517YV87 | GT83 | 7 | 490 | 3 | 479 | 0.6558 |
0.6941 |
| A0A8J2V5Q9 | GT83 | 7 | 490 | 12 | 494 | 0.6532 |
0.7005 |
| A0A0W0VXV4 | GT83 | 5 | 490 | 3 | 457 | 0.653 |
0.7122 |
| UYZ58515.1 | GT83 | 5 | 488 | 12 | 494 | 0.6509 |
0.6926 |
| L0GV37 | GT83 | 1 | 490 | 1 | 486 | 0.6503 |
0.6849 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ97-F1-model_v4 | 4 | 490 | 1 | 484 | 0.6519 |
0.686 |