Cluster: HRGMv2_2712_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2712
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2712_1 | HRGMv2_2712_1_1673 | 1829598 | 1830962 | - | 2.A.45.2.2 |
| pfam | HRGMv2_2712_1 | HRGMv2_2712_1_1674 | 1831144 | 1831998 | - | NYN | OST-HTH |
| CAZyme | HRGMv2_2712_1 | HRGMv2_2712_1_1675 | 1832108 | 1832893 | - | CE4 |
Gene ID: HRGMv2_2712_1_1673
Type: TC
Location: 1829598 - 1830962 (-)
Type: TC
Location: 1829598 - 1830962 (-)
Gene ID: HRGMv2_2712_1_1674
Type: pfam
Location: 1831144 - 1831998 (-)
Type: pfam
Location: 1831144 - 1831998 (-)
Gene ID: HRGMv2_2712_1_1675
Type: CAZyme
Location: 1832108 - 1832893 (-)
Type: CAZyme
Location: 1832108 - 1832893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp934589185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2712_1_1674 | vegetarian > omnivore | 1.14335 | 0.00007 |