Cluster: HRGMv2_2712_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2712
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2712_1 | HRGMv2_2712_1_400 | 408843 | 410738 | + | CBM48 | GH13_9 |
| CAZyme | HRGMv2_2712_1 | HRGMv2_2712_1_401 | 410752 | 414243 | + | GH13_39 | GT5 |
| pfam | HRGMv2_2712_1 | HRGMv2_2712_1_402 | 414221 | 415540 | + | Patatin |
| TC | HRGMv2_2712_1 | HRGMv2_2712_1_403 | 415733 | 416509 | + | 2.A.5.5.2 |
Gene ID: HRGMv2_2712_1_400
Type: CAZyme
Location: 408843 - 410738 (+)
Type: CAZyme
Location: 408843 - 410738 (+)
Gene ID: HRGMv2_2712_1_401
Type: CAZyme
Location: 410752 - 414243 (+)
Type: CAZyme
Location: 410752 - 414243 (+)
Gene ID: HRGMv2_2712_1_402
Type: pfam
Location: 414221 - 415540 (+)
Type: pfam
Location: 414221 - 415540 (+)
Gene ID: HRGMv2_2712_1_403
Type: TC
Location: 415733 - 416509 (+)
Type: TC
Location: 415733 - 416509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp934589185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.