Cluster: HRGMv2_2704_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2704_40 | HRGMv2_2704_40_4 | 3243 | 5807 | + | GT51 |
| pfam | HRGMv2_2704_40 | HRGMv2_2704_40_5 | 5925 | 6830 | - | 2-Hacid_dh | 2-Hacid_dh_C | KARI_N |
| pfam | HRGMv2_2704_40 | HRGMv2_2704_40_6 | 6918 | 8009 | - | Aminotran_5 |
| TC | HRGMv2_2704_40 | HRGMv2_2704_40_7 | 8250 | 9500 | + | 2.A.49.9.2 |
Gene ID: HRGMv2_2704_40_4
Type: CAZyme
Location: 3243 - 5807 (+)
Type: CAZyme
Location: 3243 - 5807 (+)
Gene ID: HRGMv2_2704_40_5
Type: pfam
Location: 5925 - 6830 (-)
Type: pfam
Location: 5925 - 6830 (-)
Gene ID: HRGMv2_2704_40_6
Type: pfam
Location: 6918 - 8009 (-)
Type: pfam
Location: 6918 - 8009 (-)
Gene ID: HRGMv2_2704_40_7
Type: TC
Location: 8250 - 9500 (+)
Type: TC
Location: 8250 - 9500 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas coprocola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.