Cluster: HRGMv2_2704_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2704
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2704_3 | HRGMv2_2704_3_1 | 348 | 1835 | - | GH77 |
| TC | HRGMv2_2704_3 | HRGMv2_2704_3_2 | 1914 | 2771 | - | 3.A.1.1.45 |
| TC | HRGMv2_2704_3 | HRGMv2_2704_3_3 | 2768 | 3691 | - | 3.A.1.1.45 |
| TC | HRGMv2_2704_3 | HRGMv2_2704_3_4 | 3848 | 5164 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2704_3_1
Type: CAZyme
Location: 348 - 1835 (-)
Type: CAZyme
Location: 348 - 1835 (-)
Gene ID: HRGMv2_2704_3_2
Type: TC
Location: 1914 - 2771 (-)
Type: TC
Location: 1914 - 2771 (-)
Gene ID: HRGMv2_2704_3_3
Type: TC
Location: 2768 - 3691 (-)
Type: TC
Location: 2768 - 3691 (-)
Gene ID: HRGMv2_2704_3_4
Type: TC
Location: 3848 - 5164 (-)
Type: TC
Location: 3848 - 5164 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas coprocola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.