Cluster: HRGMv2_2685_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2685_29 | HRGMv2_2685_29_1 | 196 | 1800 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2685_29 | HRGMv2_2685_29_2 | 1835 | 2632 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2685_29 | HRGMv2_2685_29_3 | 2698 | 3813 | - | Acyl_transf_3 |
| TC | HRGMv2_2685_29 | HRGMv2_2685_29_4 | 4305 | 5771 | + | 4.C.1.1.4 |
| pfam | HRGMv2_2685_29 | HRGMv2_2685_29_5 | 5799 | 6041 | + | PP-binding |
| NULL(UNKNOWN) | HRGMv2_2685_29 | HRGMv2_2685_29_6 | 6093 | 7256 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2685_29 | HRGMv2_2685_29_7 | 7399 | 8538 | + | 2.A.1.15.18 |
Gene ID: HRGMv2_2685_29_1
Type: CAZyme
Location: 196 - 1800 (-)
Type: CAZyme
Location: 196 - 1800 (-)
Gene ID: HRGMv2_2685_29_2
Type:
Location: 1835 - 2632 (-)
Type:
Location: 1835 - 2632 (-)
Gene ID: HRGMv2_2685_29_3
Type: pfam
Location: 2698 - 3813 (-)
Type: pfam
Location: 2698 - 3813 (-)
Gene ID: HRGMv2_2685_29_4
Type: TC
Location: 4305 - 5771 (+)
Type: TC
Location: 4305 - 5771 (+)
Gene ID: HRGMv2_2685_29_5
Type: pfam
Location: 5799 - 6041 (+)
Type: pfam
Location: 5799 - 6041 (+)
Gene ID: HRGMv2_2685_29_6
Type:
Location: 6093 - 7256 (+)
Type:
Location: 6093 - 7256 (+)
Gene ID: HRGMv2_2685_29_7
Type: TC
Location: 7399 - 8538 (+)
Type: TC
Location: 7399 - 8538 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.