PROTEIN: HRGMv2_2685_29_6
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Protein File & Metadata
Source:
HRGMv2_2685_29_6.pdb
Genome ID:
Protein ID:
HRGMv2_2685_29_6
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Protein Sequence
MYFFRREKVQ CRYQFSLRDA VDITLLQRAL TTALASAPYY TQRLVQEKRE MWLEPNTEPC 60 LVYPGSTMRD IPEQTNGYLF CISCEGDTVY FDWHHFLLDG HGVSPLFTSI LEQYCNLRYG 120 TAFAVQQIVC DPPYDMEAML AEYPPVEGGS DAIQRDVVQT YEGALRRTRV CLSKQSLVEK 180 ALANNAKPVS ALMGLLCMAM REYLGKENIQ YSYSADTRDV AGVPHALYNC VCSFEHTVQL 240 QAQTRLADFV ADVDADIRRD LQPQSKRRRM TEQLGWVYKV DQQKAPLRIK QRVFQMGEYI 300 GGTISDFWLS YLGNPLMPAT PELAQYTTDF GVWVPPEGAS VGVEAASLNG KIILCIHNKA 360 PNPGLADILR KTFENEGVAV LEAEDLD 387
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0ERT7-F1-model_v4 | 1 | 378 | 11 | 437 | 0.7717 |
0.8531 |
| AF-K0F199-F1-model_v4 | 1 | 377 | 15 | 414 | 0.7647 |
0.8277 |
| AF-K0EVX2-F1-model_v4 | 7 | 378 | 1 | 389 | 0.7553 |
0.808 |
| AF-Q9HYR6-F1-model_v4 | 1 | 379 | 13 | 433 | 0.7549 |
0.8369 |
| AF-K0FB89-F1-model_v4 | 1 | 379 | 15 | 413 | 0.7449 |
0.8039 |
| AF-Q09710-F1-model_v4 | 1 | 379 | 12 | 446 | 0.7445 |
0.8304 |
| AF-P9WLD1-F1-model_v4 | 1 | 378 | 9 | 429 | 0.743 |
0.8165 |
| AF-A0A1D8PHJ5-F1-model_v4 | 1 | 379 | 10 | 418 | 0.7409 |
0.805 |
| AF-K0EPI1-F1-model_v4 | 1 | 378 | 11 | 417 | 0.7356 |
0.7979 |
| AF-K0EVE5-F1-model_v4 | 1 | 379 | 6 | 440 | 0.7353 |
0.8192 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A4FHR6-F1-model_v4 | GT28 | 1 | 378 | 382 | 795 | 0.5977 |
0.8305 |
| AF-A0A7R7HY87-F1-model_v4 | GT28 | 1 | 379 | 349 | 768 | 0.5831 |
0.7964 |
| AF-W5WA33-F1-model_v4 | GT28 | 1 | 379 | 383 | 778 | 0.5823 |
0.8001 |
| AF-A0A6H1REK1-F1-model_v4 | GT28 | 1 | 379 | 380 | 789 | 0.5807 |
0.8001 |
| AF-A0A223RRK0-F1-model_v4 | GT28 | 1 | 379 | 391 | 814 | 0.5793 |
0.8103 |
| A0A1G6KFY6 | GT28 | 1 | 381 | 413 | 810 | 0.5686 |
0.7874 |
| AF-A0A810L0P6-F1-model_v4 | GT28 | 1 | 379 | 399 | 818 | 0.5677 |
0.7911 |
| A0A9Q8R8L9 | GT1 | 1 | 384 | 461 | 911 | 0.5674 |
0.8056 |
| AF-A0A1H1TJ86-F1-model_v4 | GT28 | 1 | 379 | 425 | 838 | 0.5667 |
0.7989 |
| AF-A0A1A8ZH35-F1-model_v4 | GT28 | 1 | 379 | 423 | 840 | 0.5641 |
0.8028 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223RRK0 | GT28 | 1 | 379 | 391 | 814 | 0.5793 |
0.8103 |
| A0A1G6KFY6 | GT28 | 1 | 381 | 413 | 810 | 0.5686 |
0.7874 |
| A0A810L0P6 | GT28 | 1 | 379 | 399 | 818 | 0.5677 |
0.7911 |
| A0A9Q8R8L9 | GT1 | 1 | 384 | 461 | 911 | 0.5674 |
0.8056 |
| A0A1H1TJ86 | GT28 | 1 | 379 | 425 | 838 | 0.5667 |
0.7989 |
| A0A1C4XH88 | GT28 | 1 | 378 | 434 | 854 | 0.5591 |
0.8001 |
| AVT29363.1 | GT28 | 1 | 379 | 409 | 839 | 0.5579 |
0.785 |
| A0A7W9KMN1 | GT28 | 1 | 379 | 380 | 757 | 0.5573 |
0.7593 |
| A0A6M7YQH5 | PL1_4 | 1 | 377 | 399 | 868 | 0.5517 |
0.7861 |
| WBB68552.1 | GT28 | 1 | 379 | 456 | 918 | 0.5375 |
0.7899 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1q9j-assembly2.cif.gz_B | 1 | 378 | 9 | 396 | 0.721 |
0.7711 |
| 1q9j-assembly1.cif.gz_A | 1 | 378 | 11 | 385 | 0.7148 |
0.7608 |
| 2zba-assembly2.cif.gz_B | 1 | 385 | 7 | 430 | 0.713 |
0.773 |
| 3b2s-assembly1.cif.gz_A | 1 | 385 | 8 | 448 | 0.7113 |
0.7843 |
| 2zba-assembly1.cif.gz_A | 1 | 385 | 8 | 435 | 0.7106 |
0.7741 |
| 2rkv-assembly1.cif.gz_A | 1 | 385 | 8 | 443 | 0.7097 |
0.7788 |
| 3b30-assembly1.cif.gz_A | 1 | 385 | 9 | 446 | 0.7095 |
0.781 |
| 2rkt-assembly1.cif.gz_A | 1 | 385 | 10 | 437 | 0.7084 |
0.7734 |
| 5du9-assembly2.cif.gz_B | 1 | 379 | 7 | 419 | 0.7073 |
0.7774 |
| 2zba-assembly3.cif.gz_C | 1 | 385 | 8 | 429 | 0.7065 |
0.765 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q09710-F1-model_v4 | 1 | 379 | 12 | 446 | 0.7445 |
0.8304 |
| AF-P9WLD1-F1-model_v4 | 1 | 378 | 9 | 429 | 0.743 |
0.8165 |
| AF-P9WLD0-F1-model_v4 | 1 | 378 | 8 | 429 | 0.7385 |
0.812 |
| AF-A1T9S1-F1-model_v4 | 1 | 379 | 11 | 411 | 0.7355 |
0.7959 |
| AF-Q1B849-F1-model_v4 | 1 | 379 | 12 | 407 | 0.7348 |
0.7908 |
| AF-A1UGV8-F1-model_v4 | 1 | 379 | 12 | 407 | 0.7348 |
0.7908 |
| AF-A3Q0G0-F1-model_v4 | 1 | 379 | 12 | 407 | 0.7341 |
0.7902 |
| AF-A0PQ31-F1-model_v4 | 1 | 379 | 11 | 408 | 0.7325 |
0.7918 |
| AF-P53304-F1-model_v4 | 1 | 382 | 6 | 468 | 0.7227 |
0.8156 |
| AF-P9WIN4-F1-model_v4 | 1 | 378 | 11 | 415 | 0.7161 |
0.7831 |