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Cluster: HRGMv2_2683_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2683_17 HRGMv2_2683_17_3 1595 4210 + CBM67 | GH78
pfam HRGMv2_2683_17 HRGMv2_2683_17_4 4321 5169 - AP_endonuc_2
CAZyme HRGMv2_2683_17 HRGMv2_2683_17_5 5173 6987 - CBM32 | GH43_28
CAZyme HRGMv2_2683_17 HRGMv2_2683_17_6 6992 9199 - GH2
pfam HRGMv2_2683_17 HRGMv2_2683_17_7 9287 10777 - MFS_2
CAZyme HRGMv2_2683_17 HRGMv2_2683_17_8 11006 12307 + GH1
STP HRGMv2_2683_17 HRGMv2_2683_17_9 12362 12898 - TetR_N
sulfatase HRGMv2_2683_17 HRGMv2_2683_17_10 13093 14100 + S1_2
TC HRGMv2_2683_17 HRGMv2_2683_17_11 14176 15522 + 2.A.66.1.13
Gene ID: HRGMv2_2683_17_3
Type: CAZyme
Location: 1595 - 4210 (+)
Gene ID: HRGMv2_2683_17_4
Type: pfam
Location: 4321 - 5169 (-)
Gene ID: HRGMv2_2683_17_5
Type: CAZyme
Location: 5173 - 6987 (-)
Gene ID: HRGMv2_2683_17_6
Type: CAZyme
Location: 6992 - 9199 (-)
Gene ID: HRGMv2_2683_17_7
Type: pfam
Location: 9287 - 10777 (-)
Gene ID: HRGMv2_2683_17_8
Type: CAZyme
Location: 11006 - 12307 (+)
Gene ID: HRGMv2_2683_17_9
Type: STP
Location: 12362 - 12898 (-)
Gene ID: HRGMv2_2683_17_10
Type: sulfatase
Location: 13093 - 14100 (+)
Gene ID: HRGMv2_2683_17_11
Type: TC
Location: 14176 - 15522 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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