Cluster: HRGMv2_2683_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2683
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2683_10 | HRGMv2_2683_10_25 | 27751 | 29091 | + | 3.A.1.1.45 |
| TC | HRGMv2_2683_10 | HRGMv2_2683_10_26 | 29194 | 30045 | + | 3.A.1.1.45 |
| TC | HRGMv2_2683_10 | HRGMv2_2683_10_27 | 30045 | 30887 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2683_10 | HRGMv2_2683_10_28 | 30901 | 32373 | + | GH77 |
Gene ID: HRGMv2_2683_10_25
Type: TC
Location: 27751 - 29091 (+)
Type: TC
Location: 27751 - 29091 (+)
Gene ID: HRGMv2_2683_10_26
Type: TC
Location: 29194 - 30045 (+)
Type: TC
Location: 29194 - 30045 (+)
Gene ID: HRGMv2_2683_10_27
Type: TC
Location: 30045 - 30887 (+)
Type: TC
Location: 30045 - 30887 (+)
Gene ID: HRGMv2_2683_10_28
Type: CAZyme
Location: 30901 - 32373 (+)
Type: CAZyme
Location: 30901 - 32373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.