Cluster: HRGMv2_2683_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2683
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2683_5 | HRGMv2_2683_5_17 | 16076 | 17515 | + | GH1 |
| sulfatase | HRGMv2_2683_5 | HRGMv2_2683_5_18 | 17596 | 18627 | + | S1_15 |
| TF | HRGMv2_2683_5 | HRGMv2_2683_5_19 | 18771 | 19253 | + | MarR |
| TC | HRGMv2_2683_5 | HRGMv2_2683_5_20 | 19667 | 21418 | + | 3.A.1.135.5 |
| TC | HRGMv2_2683_5 | HRGMv2_2683_5_21 | 21418 | 23337 | + | 3.A.1.135.5 |
| CAZyme | HRGMv2_2683_5 | HRGMv2_2683_5_22 | 23585 | 25354 | + | GH2 |
Gene ID: HRGMv2_2683_5_17
Type: CAZyme
Location: 16076 - 17515 (+)
Type: CAZyme
Location: 16076 - 17515 (+)
Gene ID: HRGMv2_2683_5_18
Type: sulfatase
Location: 17596 - 18627 (+)
Type: sulfatase
Location: 17596 - 18627 (+)
Gene ID: HRGMv2_2683_5_19
Type: TF
Location: 18771 - 19253 (+)
Type: TF
Location: 18771 - 19253 (+)
Gene ID: HRGMv2_2683_5_20
Type: TC
Location: 19667 - 21418 (+)
Type: TC
Location: 19667 - 21418 (+)
Gene ID: HRGMv2_2683_5_21
Type: TC
Location: 21418 - 23337 (+)
Type: TC
Location: 21418 - 23337 (+)
Gene ID: HRGMv2_2683_5_22
Type: CAZyme
Location: 23585 - 25354 (+)
Type: CAZyme
Location: 23585 - 25354 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.