Cluster: HRGMv2_2683_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2683
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2683_5 | HRGMv2_2683_5_2 | 553 | 1866 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2683_5 | HRGMv2_2683_5_3 | 1922 | 3049 | + | GT28 |
| pfam | HRGMv2_2683_5 | HRGMv2_2683_5_4 | 3087 | 4643 | + | POTRA_1 |
| pfam | HRGMv2_2683_5 | HRGMv2_2683_5_5 | 4667 | 6145 | + | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_2683_5 | HRGMv2_2683_5_6 | 6389 | 6616 | + | 3.D.1.6.4 |
Gene ID: HRGMv2_2683_5_2
Type: TC
Location: 553 - 1866 (+)
Type: TC
Location: 553 - 1866 (+)
Gene ID: HRGMv2_2683_5_3
Type: CAZyme
Location: 1922 - 3049 (+)
Type: CAZyme
Location: 1922 - 3049 (+)
Gene ID: HRGMv2_2683_5_4
Type: pfam
Location: 3087 - 4643 (+)
Type: pfam
Location: 3087 - 4643 (+)
Gene ID: HRGMv2_2683_5_5
Type: pfam
Location: 4667 - 6145 (+)
Type: pfam
Location: 4667 - 6145 (+)
Gene ID: HRGMv2_2683_5_6
Type: TC
Location: 6389 - 6616 (+)
Type: TC
Location: 6389 - 6616 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934503275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.