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Cluster: HRGMv2_2683_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2683_36 HRGMv2_2683_36_5 4021 6627 - GT51
NULL(UNKNOWN) HRGMv2_2683_36 HRGMv2_2683_36_6 6842 7216 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2683_36 HRGMv2_2683_36_7 7269 9047 - 2.A.58.2.2
NULL(UNKNOWN) HRGMv2_2683_36 HRGMv2_2683_36_8 9311 9427 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2683_36 HRGMv2_2683_36_9 9650 10306 - C60.UPA
TC HRGMv2_2683_36 HRGMv2_2683_36_10 10369 11367 - 2.A.58.2.2
TF HRGMv2_2683_36 HRGMv2_2683_36_11 11571 12080 + MarR
TC HRGMv2_2683_36 HRGMv2_2683_36_12 12064 14361 + 3.A.1.135.6
TC HRGMv2_2683_36 HRGMv2_2683_36_13 14363 16174 + 3.A.1.135.6
Gene ID: HRGMv2_2683_36_5
Type: CAZyme
Location: 4021 - 6627 (-)
Gene ID: HRGMv2_2683_36_6
Type:
Location: 6842 - 7216 (+)
Gene ID: HRGMv2_2683_36_7
Type: TC
Location: 7269 - 9047 (-)
Gene ID: HRGMv2_2683_36_8
Type:
Location: 9311 - 9427 (-)
Gene ID: HRGMv2_2683_36_9
Type: peptidase
Location: 9650 - 10306 (-)
Gene ID: HRGMv2_2683_36_10
Type: TC
Location: 10369 - 11367 (-)
Gene ID: HRGMv2_2683_36_11
Type: TF
Location: 11571 - 12080 (+)
Gene ID: HRGMv2_2683_36_12
Type: TC
Location: 12064 - 14361 (+)
Gene ID: HRGMv2_2683_36_13
Type: TC
Location: 14363 - 16174 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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