Cluster: HRGMv2_2681_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2681
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2681_1 | HRGMv2_2681_1_153 | 170178 | 171650 | - | 4.C.1.1.4 |
| TC | HRGMv2_2681_1 | HRGMv2_2681_1_154 | 171688 | 173154 | - | 4.C.1.1.4 |
| pfam | HRGMv2_2681_1 | HRGMv2_2681_1_155 | 173520 | 174635 | + | Acyl_transf_3 |
| NULL(UNKNOWN) | HRGMv2_2681_1 | HRGMv2_2681_1_156 | 174702 | 175496 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2681_1 | HRGMv2_2681_1_157 | 175531 | 177135 | + | GT4 |
Gene ID: HRGMv2_2681_1_153
Type: TC
Location: 170178 - 171650 (-)
Type: TC
Location: 170178 - 171650 (-)
Gene ID: HRGMv2_2681_1_154
Type: TC
Location: 171688 - 173154 (-)
Type: TC
Location: 171688 - 173154 (-)
Gene ID: HRGMv2_2681_1_155
Type: pfam
Location: 173520 - 174635 (+)
Type: pfam
Location: 173520 - 174635 (+)
Gene ID: HRGMv2_2681_1_156
Type:
Location: 174702 - 175496 (+)
Type:
Location: 174702 - 175496 (+)
Gene ID: HRGMv2_2681_1_157
Type: CAZyme
Location: 175531 - 177135 (+)
Type: CAZyme
Location: 175531 - 177135 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.