Cluster: HRGMv2_2681_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2681
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2681_12 | HRGMv2_2681_12_62 | 65628 | 65855 | - | 3.D.1.6.4 |
| pfam | HRGMv2_2681_12 | HRGMv2_2681_12_63 | 66102 | 67580 | - | Mur_ligase_C | Mur_ligase_M |
| pfam | HRGMv2_2681_12 | HRGMv2_2681_12_64 | 67604 | 69172 | - | POTRA_1 |
| CAZyme | HRGMv2_2681_12 | HRGMv2_2681_12_65 | 69207 | 70334 | - | GT28 |
| TC | HRGMv2_2681_12 | HRGMv2_2681_12_66 | 70386 | 71699 | - | 2.A.103.1.3 |
Gene ID: HRGMv2_2681_12_62
Type: TC
Location: 65628 - 65855 (-)
Type: TC
Location: 65628 - 65855 (-)
Gene ID: HRGMv2_2681_12_63
Type: pfam
Location: 66102 - 67580 (-)
Type: pfam
Location: 66102 - 67580 (-)
Gene ID: HRGMv2_2681_12_64
Type: pfam
Location: 67604 - 69172 (-)
Type: pfam
Location: 67604 - 69172 (-)
Gene ID: HRGMv2_2681_12_65
Type: CAZyme
Location: 69207 - 70334 (-)
Type: CAZyme
Location: 69207 - 70334 (-)
Gene ID: HRGMv2_2681_12_66
Type: TC
Location: 70386 - 71699 (-)
Type: TC
Location: 70386 - 71699 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900765705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.