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Cluster: HRGMv2_2681_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2681_10 HRGMv2_2681_10_38 41821 43632 - 3.A.1.135.6
TC HRGMv2_2681_10 HRGMv2_2681_10_39 43634 45931 - 3.A.1.135.6
TF HRGMv2_2681_10 HRGMv2_2681_10_40 45915 46424 - MarR
TC HRGMv2_2681_10 HRGMv2_2681_10_41 46628 47626 + 2.A.58.2.2
peptidase HRGMv2_2681_10 HRGMv2_2681_10_42 47688 48344 + C60.UPA
NULL(UNKNOWN) HRGMv2_2681_10 HRGMv2_2681_10_43 48744 48860 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2681_10 HRGMv2_2681_10_44 49125 50903 + 2.A.58.2.2
NULL(UNKNOWN) HRGMv2_2681_10 HRGMv2_2681_10_45 50955 51329 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2681_10 HRGMv2_2681_10_46 51568 54144 + GT51
Gene ID: HRGMv2_2681_10_38
Type: TC
Location: 41821 - 43632 (-)
Gene ID: HRGMv2_2681_10_39
Type: TC
Location: 43634 - 45931 (-)
Gene ID: HRGMv2_2681_10_40
Type: TF
Location: 45915 - 46424 (-)
Gene ID: HRGMv2_2681_10_41
Type: TC
Location: 46628 - 47626 (+)
Gene ID: HRGMv2_2681_10_42
Type: peptidase
Location: 47688 - 48344 (+)
Gene ID: HRGMv2_2681_10_43
Type:
Location: 48744 - 48860 (+)
Gene ID: HRGMv2_2681_10_44
Type: TC
Location: 49125 - 50903 (+)
Gene ID: HRGMv2_2681_10_45
Type:
Location: 50955 - 51329 (-)
Gene ID: HRGMv2_2681_10_46
Type: CAZyme
Location: 51568 - 54144 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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