Cluster: HRGMv2_2678_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2678
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2678_12 | HRGMv2_2678_12_38 | 38633 | 40792 | - | GH112 |
| pfam | HRGMv2_2678_12 | HRGMv2_2678_12_39 | 40822 | 41013 | - | DUF6903 |
| TC | HRGMv2_2678_12 | HRGMv2_2678_12_40 | 41025 | 41921 | - | 3.A.1.1.25 |
| TC | HRGMv2_2678_12 | HRGMv2_2678_12_41 | 41934 | 42818 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_2678_12_38
Type: CAZyme
Location: 38633 - 40792 (-)
Type: CAZyme
Location: 38633 - 40792 (-)
Gene ID: HRGMv2_2678_12_39
Type: pfam
Location: 40822 - 41013 (-)
Type: pfam
Location: 40822 - 41013 (-)
Gene ID: HRGMv2_2678_12_40
Type: TC
Location: 41025 - 41921 (-)
Type: TC
Location: 41025 - 41921 (-)
Gene ID: HRGMv2_2678_12_41
Type: TC
Location: 41934 - 42818 (-)
Type: TC
Location: 41934 - 42818 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.