Cluster: HRGMv2_2678_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2678
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2678_81 | HRGMv2_2678_81_6 | 3677 | 4951 | + | 3.A.1.1.44 |
| TC | HRGMv2_2678_81 | HRGMv2_2678_81_7 | 4975 | 5859 | + | 3.A.1.1.25 |
| TC | HRGMv2_2678_81 | HRGMv2_2678_81_8 | 5863 | 6699 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_2678_81 | HRGMv2_2678_81_9 | 6810 | 9068 | + | GH36 |
| CAZyme | HRGMv2_2678_81 | HRGMv2_2678_81_10 | 9075 | 9959 | + | GH13_4 |
Gene ID: HRGMv2_2678_81_6
Type: TC
Location: 3677 - 4951 (+)
Type: TC
Location: 3677 - 4951 (+)
Gene ID: HRGMv2_2678_81_7
Type: TC
Location: 4975 - 5859 (+)
Type: TC
Location: 4975 - 5859 (+)
Gene ID: HRGMv2_2678_81_8
Type: TC
Location: 5863 - 6699 (+)
Type: TC
Location: 5863 - 6699 (+)
Gene ID: HRGMv2_2678_81_9
Type: CAZyme
Location: 6810 - 9068 (+)
Type: CAZyme
Location: 6810 - 9068 (+)
Gene ID: HRGMv2_2678_81_10
Type: CAZyme
Location: 9075 - 9959 (+)
Type: CAZyme
Location: 9075 - 9959 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.