Cluster: HRGMv2_2678_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2678
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2678_56 | HRGMv2_2678_56_10 | 8557 | 10029 | - | GH77 |
| TC | HRGMv2_2678_56 | HRGMv2_2678_56_11 | 10043 | 10885 | - | 3.A.1.1.45 |
| TC | HRGMv2_2678_56 | HRGMv2_2678_56_12 | 10885 | 11736 | - | 3.A.1.1.45 |
| TC | HRGMv2_2678_56 | HRGMv2_2678_56_13 | 11839 | 13179 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2678_56_10
Type: CAZyme
Location: 8557 - 10029 (-)
Type: CAZyme
Location: 8557 - 10029 (-)
Gene ID: HRGMv2_2678_56_11
Type: TC
Location: 10043 - 10885 (-)
Type: TC
Location: 10043 - 10885 (-)
Gene ID: HRGMv2_2678_56_12
Type: TC
Location: 10885 - 11736 (-)
Type: TC
Location: 10885 - 11736 (-)
Gene ID: HRGMv2_2678_56_13
Type: TC
Location: 11839 - 13179 (-)
Type: TC
Location: 11839 - 13179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.